Structural Biology and Engineering
Welcome to the software corner
This website
Here, you can find the software services provided by the Arold lab, and some internal information for StruBE group members. Software is only a small aspect of work carried out in the Arold lab.
To access the public website, please visit this link.
- ContaMiner
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ContaMiner allows
rapid automated large-scale detection of contaminant crystals.
Protein contaminants, from the expression host, purification
buffers or from the affinity tags used, may crystallise instead
of a protein of interest.
Unfortunately, this only becomes clear once the crystal
structure has been determined...
ContaMiner allows rapid screening of X-ray diffraction data against the most likely proteins contaminants. - LD Motif Finder
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LD motifs (leucine–aspartic acid motifs) are short helical
protein–protein interaction motifs that have emerged as key
players in connecting cell adhesion with cell motility and
survival. LD motifs are required for embryogenesis, wound
healing and the evolution of multicellularity. LD motifs also
play roles in disease, such as in cancer metastasis or viral
infection.
The LD Motif Finder predicts the presence and location of LD motifs in protein sequences. - Coming soon
- More application are being developped, and will become available on this website when ready.
